IMAS Metadata Catalogue
oceans
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Water quality and biological data was collected from four tide-dominated river estuaries indicative of catchments with varying levels of human impacts to: 1) assess draft indicator levels for water quality, and 2) investigate biological indicators of estuarine health in NW Tasmania. The data represented by this record was collected in the Montagu River.
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These data were collected on the RV L'Astrolabe (platform code: FHZI) from 30/12/2004 to 04/01/2005 on a trip from Hobart to Dumont D'Urville. Maximum photochemical efficiency of photosystem II (PSII), also called maximum quantum yield of PSII (Fv/Fm), has become one of the most widely utilized fluorescence parameters in phytoplankton research. It represents the potential photochemical efficiency, which is the probability that the light energy captured by the photosynthetic apparatus is being utilized as photochemistry. Fv/Fm has been shown to have an instant response to variations in physical and chemical properties and is interpreted as a diagnostic of the overall health or competence of phytoplankton. Together with the absorption cross section area of PSII and chlorophyll concentration, it can be used to measure primary production (Cheah et al. 2011, Deep Sea Research). Seawater from 3 m depth was supplied continuously from the ship’s clean seawater line. FRR fluorescence yields were measured continuously at 1 minute intervals in dark-adapted state (! 15 minutes dark-adaptation) using a flash sequence consisting of a series of 100 subsaturation flashlets (1.1 μs flash duration and 2.8 μs interflash period) and a series of 20 relaxation flashlets (1.1 μs flash duration and 51.6 μs interflash period).
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This dataset consist of dissolved oxygen (DO) and temperature data collected using HOBO Dissolved Oxygen loggers (U26-001) under FRDC project 2016-067. Loggers are deployed on strings in two locations in Macquarie Harbour, Tasmania.
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This data describes the characterisation and estimated concentration of marine plastics in waters around Australia from surface net tows. The marine plastics recorded were predominantly small fragments (‘‘microplastics’’) resulting from the breakdown of larger objects made of polyethylene and polypropylene (e.g. packaging and fishing items). This data accompanies the following publication: Reisser J, Shaw J, Wilcox C, Hardesty BD, Proietti M, et al. (2013) Marine Plastic Pollution in Waters around Australia: Characteristics, Concentrations, and Pathways. PLoS ONE 8(11): e80466. doi:10.1371/journal.pone.0080466
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These files contain the metadata adopted and MATLAB code edited as well as visual plots generated in the Hongkun Honour's project. The data mainly includes the shipboard ADCP data and vertical cast type of Triaxus data collected from RV Investigator during the voyage IN2016V04 and IN2018T01 and satellite data (chlorophyll, sea level anomaly & sea surface temperature) collected from the IMOS website on the study region. The data was processed in MATLAB and then used to find visualization results, with the ultimate aim of exploring the potential of Triaxus in biogeochemistry.
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We implemented a monitoring program developed by Crawford and White (2006), which was designed to assess the current condition of six key estuaries in NW Tasmania: Port Sorell, the Leven, Inglis, Black, Montagu and Arthur River estuaries. This study considered a range of water quality and ecological indictors commonly used to monitor estuaries. These included: salinity, temperature, dissolved oxygen, turbidity, pH, nutrients (nitrate + nitrite, dissolved reactive phosphorus and ammonia), silica molybdate reactive and chlorophyll a for the water column; chlorophyll a and macroinvertebrate community structure amongst the sediments. The data represented by this record was collected in Black River.
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Achived photoquadrats are available from Reef Life Survey (RLS) surveys undertaken before and after a 2016 bleaching event at all major coral reef systems in Australia. This collection was analysed by experts to annotate coral cover to the highest possible taxonomic resolution for ~40,000 images. Specific Australian Marine Parks included are Ashmore Reef, Mermaid Reef and Coral Sea. NOTE: The high resolution coral taxonomic identification data has been assimilated into the larger global RLS photoquadrats data collection, currently held by AODN. This data is intended to be published before the end of 2020. Once published, the subset of annotation data generated by this project will be published as an excerpt attached to this record.
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Water level heights were measured every 5 minutes at five station locations in the 70km length Tamar estuary, Tasmania, for six months. Pressure loggers deployed in the water recorded total pressure and the inverse barometer effect was accounted for by two additional pressure loggers deployed above ground within 15km of a station. The data include barometric pressure, water temperature, and water level relative to Australian Height Datum (AHD83). The data captures tidal amplification and asymmetry between ebb and flood tides in the estuary for the purpose of a research project completed in 2018 by Karen Palmer. Based on the Tamar estuary model created for NRM North by BMT WBM Pty Ltd using TUFLOW FV (with permission), a new hydrodynamic model was created and calibrated with observed water levels. Different scenarios of sea level rise and bathymetry change were then simulated to model the effects on tidal amplitude and phase.
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This record provides an overview of the scope and research data outputs of NESP Marine Biodiversity Hub Project E2 - "Characterising anthropogenic underwater noise to improve understanding and management of acoustic impacts to marine wildlife". For specific data outputs from this project, please see child records associated with this metadata. -------------------- Shipping noise is a marine pollutant that contributes significantly to the marine soundscape and is a stressor of marine animals, particularly marine mammals. In Australia, the characterisation and actual impacts of shipping noise on species behaviour are not clearly understood and information is needed. This research will provide quantitative spatial and temporal maps of shipping noise to inform on noise exposure and impacts to MNES within the EEZ and in WHA’s. The outputs will provide key information to marine management agencies such as DoEE, AMSA and GBRMPA to help them meet responsibilities and obligations under international and national law and policy to minimise the impacts of shipping noise on MNES. Planned Outputs • A suite of maps of chronic shipping noise for key areas and species of concern, identifying key management areas and gross polluters. • A database of ship source spectra for predominant large vessels • A paper on improved methods or ambient noise estimation • Report on the quantification of shipping noise on Matters of National Environmental Significance • Final report on the characterisation of shipping noise in Australia
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We dissect the spokes of the ferrous wheel associated with Fe demand by quantifying the uptake rates of heterotrophic bacteria and phytoplankton in the subantarctic Southern Ocean during summer and situate these findings within a seasonal context. To do so, we conducted bioassays in which the effects of light on Fe photochemistry and uptake physiology were studied by comparing light and dark incubations, and the effects of DOC supply and competition between phytoplankton and heterotrophic bacteria were examined by isolating bacteria from the larger members of the ferrous wheel by pre-incubation size fractionation.