A 12-month program was developed and implemented in order to obtain baseline information on water quality (salinity, water temperature, dissolved oxygen, turbidity, pH, dissolved nutrients, silica), ecological condition as shown by Chlorophyll a, benthic macroinvertebrates, pathogens, and habitat extent determined from habitat mapping. Five key estuaries and coastal waters were assessed in the Southern NRM Region of Tasmania. This data includes sampling from Pitt Water / Orielton Lagoon, North West Bay, Port Cygnet, Little Swanport, Moulting Lagoon / Great Swanport.

Seasonal patterns in the in situ ecophysiology of the common habitat-forming seaweeds Ecklonia radiata, Phyllospora comosa, and Macrocystis pyrifera were investigated at different latitudes and depths in southeastern Australia. We used multiple performance indicators (photosynthetic characteristics, pigment content, chemical composition, stable isotopes, nucleic acids) to assess the ecophysiology of seaweeds near the northern and southern margins of their range, along a depth gradient (E. radiata only), over a two year period (September 2010 – August 2012).

Water quality and biological data was collected from four tide-dominated river estuaries indicative of catchments with varying levels of human impacts to: 1) assess draft indicator levels for water quality, and 2) investigate biological indicators of estuarine health in NW Tasmania. This data includes sampling from Detention River, Duck Bay, Montagu River and Black River

The data is the quantitative abundance of fish derived from underwater visual census methods involving transect counts at rocky reef sites around Tasmania. This data forms part of a larger dataset that also surveyed megafaunal invertebrate abundance and algal cover for the area. The aggregated dataset allows examination of changes in Tasmanian shallow reef floral and faunal communities over a decadal scale - initial surveys were conducted in 1992-1995, and again at the same sites in 2006-2007. There are plans for ongoing surveys. An additional component was added in the latter study - a boat ramp study looking at the proximity of boat ramps and their effects of fishing. We analysed underwater visual census data on fishes and macroinvertebrates (abalone and rock lobsters) at 133 shallow rocky reef sites around Tasmania that ranged from 0.6 - 131 km from the nearest boat ramp. These sites were not all the same as those used for the comparison of 1994 and 2006 reef communities. The subset of 133 sites examined in this component consisted of only those sites that were characterized by the two major algal (kelp) types (laminarian or fucoid dominated). Sites with atypical algal assemblages were omitted from the 196 sites surveyed in 2006. This study aimed to examine reef community data for changes at the community level, changes in species richness and introduced species populations, and changes that may have resulted from ocean warming and fishing. The methods are described in detail in Edgar and Barrett (1997). Primarily the data are derived from transects at 5 m depth and/or 10 m depth at each site surveyed. The underwater visual census (UVC) methodology used to survey rocky reef communities was designed to maximise detection of (i) changes in population numbers and size-structure (ii) cascading ecosystem effects associated with disturbances such as fishing, (iii) long term change and variability in reef assemblages.

Physical and chemical parameters at five Pacific oyster (Crassostrea gigas) growing areas in Tasmania - Pittwater, Pipeclay Lagoon, Little Swanport, Georges Bay and Simpsons Bay - were measured as part of a study to determine the carrying capacity of the areas for oyster farming. This has provided valuable environmental data for these areas. The hydrodynamic regimes at each area except Simpsons Bay were studied, including high and low water volumes, flushing rates, flow rates and depth contours. Temperature, salinity and concentrations of nitrates, phosphates, silicates and chlorophyll a were measured monthly at several sites in each area. The change in these parameters over different time scales also was examined at two sites in Pittwater and indicated temporal and spatial variability in the environmental parameters measured.

This data presents the results of seabed mapping and habitat classification surveys completed in Darwin Harbour during 2011 and 2013 as part of the Northern Territory Government's marine habitat mapping program. This research is a collaboration between Geoscience Australia (GA), the Australian Institute of Marine Science (AIMS), the Department of Land Resource Management (DLRM) and the Darwin Port Corporation. Key objectives are to: - Produce detailed maps of the bathymetry and derived parameters such as slope and rugosity, - Classify the seabed into areas of hard and soft substrate, and, - Produce seabed habitat maps (or seascapes). Key outcomes from the surveys include: 1. Improved understanding of the seabed of Darwin Harbour. The main seabed geomorphic features identified in Darwin Harbour include banks, ridges, plains and scarps, and a deep central channel that divides into smaller and shallower channels. Acoustically hard substrates are found mostly on banks and are associated with rocky reef and sponge gardens, and are often overlain by a thin veneer of sandy sediment. In contrast, plains and channels are characterised by acoustically soft substrates and are associated with fine sediments (mud and sand). 2. Classification of physical seabed properties to produce a Seascape Map for Darwin Harbour. Six seascape classes (potential habitats) were derived using an Iterative Self Organising (ISO) unsupervised classification scheme. These six classes are related to statistically unique combinations of seabed substrate, relief, bedform and presence of sediment veneer (quite often inferred from presence of epibenthic biota).