The Flinders CMR AUV survey was a pilot study undertaken in June 2013 as part of the National Marine Biodiversity Hub's National monitoring, evaluation and reporting theme. The aim of this theme is to develop a blueprint for the sustained monitoring of the South-east Commonwealth Marine Reserve Network. The particular aim of the survey was to contribute to an inventory of the distribution and cover of epibenthic biota in the reserve using IMOS AUV 'Sirius'. Data contained here represents a scored subset of the ~ 36,700 images collected at the Flinders CMR. Images were scored for proportion cover of visible macrobiota using 25 random points superimposed on each image. Taxon were biologically classified using CATAMI (http://catami.org/).

These data were collected on the RV L'Astrolabe (platform code: FHZI) from 30/12/2004 to 04/01/2005 on a trip from Hobart to Dumont D'Urville. Maximum photochemical efficiency of photosystem II (PSII), also called maximum quantum yield of PSII (Fv/Fm), has become one of the most widely utilized fluorescence parameters in phytoplankton research. It represents the potential photochemical efficiency, which is the probability that the light energy captured by the photosynthetic apparatus is being utilized as photochemistry. Fv/Fm has been shown to have an instant response to variations in physical and chemical properties and is interpreted as a diagnostic of the overall health or competence of phytoplankton. Together with the absorption cross section area of PSII and chlorophyll concentration, it can be used to measure primary production (Cheah et al. 2011, Deep Sea Research). Seawater from 3 m depth was supplied continuously from the ship’s clean seawater line. FRR fluorescence yields were measured continuously at 1 minute intervals in dark-adapted state (! 15 minutes dark-adaptation) using a flash sequence consisting of a series of 100 subsaturation flashlets (1.1 μs flash duration and 2.8 μs interflash period) and a series of 20 relaxation flashlets (1.1 μs flash duration and 51.6 μs interflash period).

This record includes datasets pertaining to the appendix of Jeremy Asimus' thesis. This includes: Appendix A: Unpublished major, trace element and Sr-Nd-Pb-Hf isotope analyses from volcanic and continental rocks dredged at Gulden Draak Rise, Batavia Rise, Dirk Hartog Ridge and the Naturaliste Plateau within the Perth Abyssal Plain. These rocks were collected by the Southern Surveyor (SS2011_V06 voyage and SS2005_V09). Appendix B: Unpublished monazite U-Pb geochronology results from a metapelite (D03_002) at Rig Seismic Seamount. This metapelite was collected by the RV Investigator.

This dataset describes the predicted occurrence of juvenile sharks around Northwest Australia, mapped over a 0.01 degree spatial grid. Juvenile sharks were mapped at two taxonomic levels: order by including all juvenile sharks sampled (all juveniles) and species by considering the three most abundant species sampled separately (grey reef (Carcharhinus amblyrhynchos), sandbar (Carcharhinus plumbeus), and whitetip reef (Triaenodon obesus) sharks). The data cover the period 2003-2013 and are derived from an analysis of count data derived from baited remote underwater videos deployed through various sampling programs. Further detail can be found in the following peer-reviewed publication: Oh, BZL, Sequeira, AMM, Meekan, MG, Ruppert, JLW and Meeuwig, JJ (2017), Predicting occurrence of juvenile shark habitat to improve conservation planning. Conservation Biology, 31: 635–645. doi:10.1111/cobi.12868 Below is a full list of species, with contributions to the total counted (%): -------------------------------------------------- Silvertip shark / Carcharhinus albimarginatus – 4.14% Grey reef shark / Carcharhinus amblyrhynchos – 28.06% Bronze whaler / Carcharhinus brachyurus – 0.18% Galapagos shark / Carcharhinus galapagensis – 0.09% Bull shark / Carcharhinus leucas – 0.18% Common-Australian blacktip shark / Carcharhinus limbatus-C.tilstoni – 1.38% Blacktip reef shark / Carcharhinus melanopterus – 1.56% Sandbar shark / Carcharhinus plumbeus – 4.78% Spot-tail shark / Carcharhinus sorrah – 0.18% Tiger shark / Galeocerdo cuvier – 2.39% Sliteye-Sharpnose shark / Loxodon macrorhinus-Rhizoprionodon spp. – 6.35% Lemon shark / Negaprion acutidens – 1.01% Whitetip reef shark / Triaenodon obesus – 18.95% Tawny shark / Nebrius ferrugineus – 0.83% Grey carpetshark / Chiloscyllium punctatum – 1.38% Taselled wobbegong / Eucrossorhinus dasypogon – 0.09% Scalloped hammerhead / Sphyrna lewini – 0.46% Great hammerhead / Sphyrna mokarran – 3.86% Zebra shark / Stegostoma fasciatum – 0.83% Sicklefin houndshark / Hemitriakis falcata – 1.01% Grey gummy shark / Mustelus ravidus – 0.28% Archived BRUVS video files used in this study are the intellectual property of multiple institutions and industry partners and are not published in this record. See credits for further information.

This project used marine benthic imagery and fine-scale oceanographic data to refine existing models of the contemporary circumpolar distribution of Antarctic benthic biodiversity, and used oceanographic models developed in the ACEAS program to generate spatial predictions of the distribution of various aspects on benthic biodiversity and blue carbon under future climate scenarios. ***Access to data is currently embargoed, to be made available ~June 2026***

This project determined the ecological effect of coastal wastewater treatment plant (WWTP) outfalls in two different coastal settings. Treated effluent, seawater, and marine sediments were collected from two WWTP outfalls located in South Australia (Glenelg & St Kilda). This is a shallow and retentive receiving environment and may accumulate effluent contaminants. Additionally, sediments were collected from another WWTP outfall in New South Wales (Malabar). This deep-water outfall discharges into a highly dispersive environment and offers a point of comparison for contaminant retention with the outfalls located in South Australia. Work focused on five contaminants that water quality managers had identified in previous NESP MaC work (Project 1.16) as being highly important: nutrients and metals (traditional effluent pollutants); and antibiotics, per- and poly-fluoroalkyl substances (PFAS), and microplastics (contaminants of emerging concern). This record describes the results from the sediment sampling component of this study. Results from the effluent and seawater sampling are described separately by the record 'Effluent and seawater sampling data from wastewater treatment plant outfalls' (https://doi.org/10.25959/648J-HR45).

Model output from a circumpolar realisation of the Regional Ocean Modelling System (ROMS). Model was run at a horizontal resolution of 1/4 degree and 31 vertical levels. Spatial domain was circumpolar out to 30 degrees South. Forcing comes from prescribed salt and heat fluxes based on a derived climatology from Tamura et al (2008). For open water regions the Tamura data is blended with open-water heat, salt and surface stress fluxes from a monthly NCEP2 climatology.