This record provides an overview of the NESP Marine and Coastal Hub Research Plan 2023 project "Monitoring, aggregation areas and approaches to improve data effectiveness for southern right whale conservation". For specific data outputs from this project, please see child records associated with this metadata. -------------------- Southern right whales are listed as Endangered under the EPBC Act and are recovering slowly from historical whaling. In Australia, recovery differs between the growing western population and the more poorly understood eastern population, where available data are largely opportunistic. Improved abundance estimates, photo-identification workflows, aggregation-area assessment, and understanding of connectivity are needed to support conservation management. This project delivered priority information for southern right whale conservation through four linked components: (1) long-term aerial surveys of the western population; (2) expansion and integration of photo-identification datasets within the Australian Right Whale Photo-Identification Catalogue (ARWPIC); (3) development of statistical approaches to combine opportunistic and systematic observations; and (4) collection of movement and genomic data to assess connectivity between eastern and western subpopulations. The project continued annual aerial surveys from Perth to Ceduna to update abundance trends and reproductive parameters for the western population. Photo-identification images and metadata were collated from archived, targeted, and opportunistic sources across eastern and western aggregation areas, supporting matching of individual whales, assessment of reproductive areas, and estimation of population parameters. The project also developed methods to expand the use of opportunistic sightings data alongside systematically collected observations, improving capacity to estimate population size, trends, recovery rates, residency, site fidelity, and connectivity. Movement, photo-identification, and genomic data collected near the boundary of the eastern and western subpopulations, particularly around Encounter Bay and adjacent waters, supported assessment of population structure, whale movements, habitat use, and potential exposure to human activities. The outputs of this project support updates to the national Southern Right Whale Conservation Management Plan, Biologically Important Area (BIA) mapping, marine park management, and risk assessments for marine industries and tourism. Consultation and engagement with Indigenous groups in South Australia and Western Australia enabled communication of research goals and findings, supported knowledge sharing, and identified opportunities for collaboration and capacity building linked to southern right whale conservation. Outputs • Individual whale photo-identifications in aggregation areas [ARWPIC image catalogue] • Aerial survey data for 2023, 2024, 2026 [dataset] • Exposure to single and cumulative threats [dataset] • Whale tracking tracking, behaviour, and dive data [dataset] • Final project report [written]

This record provides an overview of the scope and research output of the NESP Marine Biodiversity Hub project "Prioritisation of research and management needs for Australian elasmobranch species". For specific data outputs from this project, please see child records associated with this metadata. -------------------- NERP successfully demonstrated new ways to get the raw ingredients for evidence-based management of previously intractable species: abundance, survival, connectivity. But there is still a need to explore/demonstrate how management can use these tools (e.g. adaptive control of bycatch, or deciding if more monitoring is needed), and which species are suitable. This project comprises (i) a workshop to re-assess Australian shark and ray species in terms of degree-of-concern, state-of-knowledge-for-management, and feasibility-of-filling-knowledge-gaps; and (ii) a desk study exemplifying one pathway to management use. In 2016, we will work with DoE to prioritize species for research and explore more management pathways. Planned Outputs • A report outlining workshop findings, recommendations relative to data gaps and effective research approaches to address these gaps. • A paper demonstrating how management can use new methods to examine adaptive monitoring of bycatch to assess impact • Presentation of results to key stakeholders and end users

This record provides an overview of the scope and research output of the NESP Marine Biodiversity Hub project "A standardised national assessment of the state of coral and rocky reef biodiversity". For specific data outputs from this project, please see child records associated with this metadata. -------------------- This project will involve integration of a national suite of reef biota Underwater Visual Census (UVC) monitoring datasets (Reef Life Survey (RLS), University of Tasmania (UTAS), Australian Institute for Marine Science (AIMS), Parks Victoria (PV), SA Department of environment, water and natural resources (DEWNR)) to provide a comprehensive update to the state of Australian Reefs report for the next national State of the Environment Report. Maps and indicator trends will show changes in the health of rocky and coral reefs nationally from 2005 to 2020. The update will include addition of a new index which summarises the population trajectories for 600-1000 reef species nationally. Individual species trajectories will provide the only threat status information for the majority of these species, assisting future listing of previously unassessed species if significant declines are detected. Planned Outputs • Maps and trends in SoE indicators • Raw data underlying SoE analyses (data use agreement must be signed with AIMS for access to that data) • Various scientific papers

This record provides an overview of the NESP Marine and Coastal Hub project "Updating knowledge of Australian white sharks". For specific data outputs from this project, please see child records associated with this metadata. -------------------- The white shark is listed as Vulnerable and Migratory under Australia’s Environment Protection and Biodiversity Conservation (EPBC) Act 1999. Previous NESP-funded research provided updated estimates of breeding population size and trend, but uncertainty remained around juvenile nursery and pupping areas, movement patterns, and connectivity between eastern and south-western Australian populations. More recent evidence has also raised the possibility of a single Australian population. This project aimed to reduce uncertainty in the status, trends and population structure of white sharks in Australian waters, with a focus on identifying biologically important habitats and improving population assessment through expanded close-kin mark-recapture (CKMR) analyses. The project combined three major components: (1) pilot tagging studies of large adult females and juvenile sharks to improve understanding of movements, pupping areas and habitat use; (2) genetic analyses to assess stock structure and connectivity using samples collected across Australia, and where possible from South Africa and New Zealand; and (3) updated population assessment using expanded tissue sample collections and close-kin mark-recapture methods. Population estimates incorporated approximately 1,000 tissue samples from New South Wales together with additional samples from South Australia and Western Australia. Juvenile abundance information from the New South Wales shark management program was also integrated into the assessment framework. CKMR approaches used genetic identification of parent-offspring and half-sibling relationships to estimate adult abundance, survival and population trends. Project outputs included updated estimates of population size and trend, improved understanding of population connectivity and movement patterns, and refined information on potential nursery and critical habitat areas. These findings support white shark recovery planning, future monitoring design, and conservation assessment in Commonwealth and state waters. Outputs • New genetic samples and sequencing data for white sharks [dataset] • Tracking data from PAT tags [dataset] • Final technical report (including recommendations for systematic future research to assist in identifying additional critical habitat for the south-western white shark population) [written]

This record provides an overview of the NESP Marine and Coastal Hub small-scale study - "Australia’s Coastal Shorebirds: Trends and Prospects". No data outputs were generated by this project. -------------------- Coastal Australia is home to 37 regularly occurring migratory shorebird species, with many protected areas including Ramsar sites designated on the basis of shorebird populations. Many migratory shorebirds are declining rapidly, and hence the focus of conservation efforts at multiple levels of government in Australia and overseas. However, trend data are now nearly 10 years old, meaning the information available to assess where conservation actions are needed most urgently and whether conservation efforts are helping species recover are outdated. To ensure populations have the best chance at recovery and that resources are allocated where they are most likely to have the greatest positive impacts, it is critical to maintain up-to-date information on species trends. This project analysed 30 years of shorebird monitoring data collected by citizen science groups across Australia and curated by BirdLife Australia’s National Shorebird Monitoring Program to update national trend estimates, while also assessing the relative effects of human pressure and conservation efforts on population trends. In particular, it focused on 15 migratory shorebird species whose conservation status was being reassessed by the Australian Department of Climate Change, Energy, the Environment and Water. This project sets the stage for building the next decade of coastal shorebird conservation activity in Australia, coordinated through the national mechanism of the End User: National Migratory Shorebird Conservation Action Plan Steering Committee, with representatives from national and state governments as well as leading shorebird experts. Outputs • Fact Sheet on Australia's coastal shorebird trends and prospects [written] • Final Project Report, including a short summary of recommendations for policy makers of key findings [written]

This record provides an overview of the scope and research output of the NESP Marine Biodiversity Hub project "Exploring the status of Western Australia’s sea snakes". For specific data outputs from this project, please see child records associated with this metadata. -------------------- All sea snakes are listed marine species under the EPBC Act and three Australian endemic species are listed as Critically Endangered or Endangered, and as such are a national conservation priority. This project examines existing data from the northwest marine region to define sea snake relative abundance and distribution patterns, including within CMRs, to refine species status. Synthesis of existing data will be useful to DOE, DPaW, Parks Australia and others. This analysis will help establish baseline data, guide future research, define abundance in and use of CMRs and refine EPBC listings and recovery plans. Planned Outputs • A report outlining the presence and relative abundance of sea snakes in northwestern Australia with a focus on reef and shoal habitats including identification of BIAs or key habitats where possible. Research and management priorities will be highlighted. • Presentation of results to key stakeholders and end users • Presentation of recommendations at scientific conferences • Communication of findings to the broader community via social media

This record provides an overview of the scope and research output of the NESP Marine Biodiversity Hub project "Analysis and elicitation to support State of the Environment reporting for the full spectrum of data availability". No data outputs were generated by this project. -------------------- The availability and quality of observation data that may be used to support State of the Environment reporting lies on a spectrum from: (i) high quality (e.g. Reef Life Survey, Long term reef monitoring programme, Temperate Reef Monitoring programme, state-based MPA monitoring programmes); (ii) moderate quality (e.g. continuous plankton recorder, occasional by catch surveys); (iii) low quality (anecdotal information) to (iv) expert beliefs but no empirical observations. We currently lack a principled process for utilising and merging data of varying quality and from different sources to form a national perspective to support State of the Environment reporting. The key unifying principle to support such a process is the extent to which the available data is representative of the environmental asset in question. As the extent to which the empirical observations accurately represent the state of the asset in both space and time diminishes, so the reliance on expert opinion increases, to the limit where the only available information is expert opinion. This project will provide an over-arching framework to consider these issues, develop practical protocols for blending different data streams with or without experts’ judgement as appropriate, and thereby provide a foundation for improving State of Environment reporting for all types of data sources, from high to low quality. It will do this by developing and applying protocols to support development of the marine chapter of SoE 2106. This currently being developed within a separate CSIRO funded project. The project will use the experience of developing this chapter to make recommendations about appropriate methodologies for future environmental reporting. Importantly the statistical approach and analysis principles will be consistent regardless of the amount or quality of the information available. As a result the framework and analysis methods will remain relevant, even as the quality and quantity of environmental data at the department’s disposal changes. This will provide the consistency of analysis and reporting that is essential to SoE. Expected Outcomes • The provision of two or three examples that demonstrate a unified approach to the use of expert opinion in SoE reporting. These examples will be identified in close collaboration with the Department and will be developed in time to support the marine chapter of 2016 State of the Environment report, contingent on the availability of resources in the second year of the project and timely interaction with the department. • Assessments of the status and trends of environmental assets in the State of the Environment report will be based on a principled and statistically defensible process that can merges and utilises data from all sources including expert opinion.

This record provides an overview of the scope and research data outputs of the NESP Marine Biodiversity Hub project "Recreational fishing in Commonwealth waters". For specific data outputs from this project, please see child records associated with this metadata. -------------------- Recent assessment have suggested that Australian marine recreational fishers (MRF) are moving further offshore in pursuit of fishing opportunities, which places them in areas managed by the Australian Government. As recreational fishers are key stakeholders in marine management, of MRF effort, catch, motivations and values are required to effectively inform administration of Australian Marine Parks (AMPs) and fisheries. In 2018 the use of exiting MRF state-wide assessment was trialled in WA and NSW to quantify fishing within the Hunter and Ningaloo AMPs. In 2019 this work will be extended to analyse state charter-boat MRF datasets with a particular emphasis on our selected AMPs and the Perth Canyon AMP. Planned Outputs • State of knowledge and gap analysis of recreational fishing in Commonwealth waters (spatial data) • On ground motivation and targets by active fishers of AMP [report]

This record provides an overview of the scope and research output of the NESP Marine Biodiversity Hub project "Quantification of risk from shipping to large marine fauna across Australia". For specific data outputs from this project, please see child records associated with this metadata. -------------------- Given the substantial increases in coastal/port development along the Australian coastline, and associated increase in recreational and commercial shipping, there is an increasing potential for adverse interactions with marine species. Two risks associated with these activities for large marine fauna are ship collisions and the impact of chronic ocean noise. Research is urgently needed to quantify these risks in both a spatial and temporal context to help develop and implement appropriate management strategies. This project aims to provide directed science (species- and area-specific) to inform decision-making by the Department of Environment in its application of the EPBC Act. Planned Outputs • Initial scoping report of ship strike risk summarising what is currently known about species that were tentatively nominated as being at-risk for ship strike, the data available, shipping size/type data needed and recommendations on what species to investigate further with a qualitative ranking from easiest to most difficult. • AIS data base for the Australian EZ and initial processing protocols. • Full Australia-wide fine-scale shipping density and average speed maps for 2012 – present including information such as vessel length, beam and draft. This data will directly feed into future noise mapping. • A national map of approximate density of small vessel distribution based on available proxies such as population density, boat registration data and boat ramp locations. • A suite of distribution and density surfaces for the various species nominated during Phase 1; • Spatial and temporal risk profiles for selected species. The risk maps will range from full fine-scale maps when data is present, to coarse-scale ‘regions of concern’ for species where distribution data is limited to approximate extent. • An updated version of a database of ship strikes (historical and recent) within the Australian EEZ Report on national ship strike risk to the limits of current data and knowledge. • Report on our ship strike risk methodological developments • Report on initial shipping noise mapping • Report on the recommendations and findings of the 2017 workshop on chronic noise in the marine environment.

This record provides an overview of the NESP Marine and Coastal Hub Research Plan 2023 project "Exploring the distribution and ecological value of seagrass at the Furneaux Islands, Tasmania". For specific data outputs from this project, please see child records associated with this metadata. -------------------- Seagrass meadows are a dominant marine ecosystem of Tayaritja (the Furneaux Group of Islands) in north-eastern Tasmania. Historical coarse-scale mapping indicated extensive beds of Posidonia, Amphibolis, Heterozostera and Zostera, with the Posidonia and Amphibiolis beds being potentially some of the largest and deepest extents in temperate Australian waters. These habitats provide ecological, social, cultural and economic values, including habitat for fish and for maireener shells used by Pakana people for traditional necklace making. This project worked in partnership with the Tasmanian Aboriginal Centre (TAC) to improve knowledge of seagrass extent, composition, population structure, ecological condition and blue carbon value around Tayaritja. Existing data were collated to guide survey design for mapping, and high-resolution satellite remote sensing was used to map seagrass beds down to a depth of approximately 30 metres, including intertidal lagoon systems associated with the Logan Lagoon Ramsar site. Field surveys, including video observations and rhizome coring, were used to validate satellite-derived maps and collect ecological samples. Outputs from this project include spatial layers of seagrass extent, variability and species composition, classified using the Seamap Australia National Benthic Habitat Classification Scheme. Rhizome samples were used to assess blue carbon storage, genetic connectivity and diversity, population structure, reproductive strategies, and relationships between seagrass, animal and microbial communities in shallow waters. The project developed new standards-based approaches for collecting, analysing, managing and reporting seagrass data, alongside training and guidance for the TAC land and sea management team and Pakana Rangers. The resulting methods and datasets will support Indigenous-led monitoring and management of the proposed Tayaritja Sea Country Indigenous Protected Area (IPA), and improve understanding of wetland values relevant to Ramsar reporting and future blue carbon opportunities. Outputs • Seagrass extent and composition map for Furneaux group [dataset] • Seagrass imagery and associated seafloor annotations [dataset] • Final project report [written]