Dive surveys using strip transects are used to determine species composition, size structure and abundance of scallops, with surveys conducted pre- and/or post fishing season. In addition, post season telephone surveys of recreational scallop dive licence-holders are conducted to collect information about scallop diving activity (including days fished, location and success), and a range of management-related issues (eg. attitudes to management options, communication strategies).

Belt transect surveys (50m) were used to monitor the benthic community structure through time at experimental (lobster additions/ research reserve sites or abalone diver urchin culls) and control sites in eastern Tasmania. Measures of percentage cover of key algal guilds, percentage of reef grazed by sea urchins, number of sea urchins (Centrostephanus rodgersii, Heliocidaris erythrogramma), Abalone (Haliotis Rubra), Rock lobsters (Jasus edwardsii) and type of substratum were recorded.

Fixed position oxygen and water temperature logger data from the Macquarie Harbour World Heritage Area (WHA). Two Hobo oxygen data loggers are positioned at approximately 15 m depth at different sites within the WHA, with the intent of monitoring representative mid-bottom water oxygen values in the WHA as these were identified in previous studies to be naturally low due to limited seawater exchange at the harbour entrance, and thus likely to be most susceptible to anthropogenic factors that may increase oxygen demand and alter WHA conservation values. These values include core habitat of the Maugean Skate, a listed threatened species. This work is funded by WHA advisory board via the Nature Conservation Branch of DPIPWE and is part of a larger study being conducted by IMAS undertaking a biological baseline study of the biodiversity of the Macquarie Harbour WHA. This data spans 08/11/14 to present (most recent update 02/02/17).

This meta data describes the raw output of the SES DEB-IBM built in NetLogo (version 6.0.1, March 2017; available from http://modelingcommons.org/browse/one_model/5348). The raw output consists of .csv files from several model runs. The detailed explanation of the model workings and background are published in Goedegebuure et al. (2018, PLoS ONE; Modelling southern elephant seals Mirounga leonina using an individual-based model coupled with a dynamic energy budget; DOI: 10.1371/journal.pone.0194950). In short: we developed an individual-based model which is coupled with a dynamic energy budget (a DEB-IBM) for southern elephant seals to demonstrate a method for detailed representation of marine mammals. We aimed to develop a model which could i) simulate energy use and life histories, as well as breeding traits of southern elephant seals in an emergent manner, ii) project a stable population over time, and iii) have realistic population dynamics and structure based on emergent life history features (such as age at first breeding, lifespan, fecundity and (yearling) survival). We evaluated the model's ability to represent a stable population over long time periods (> 10 generations), including the sensitivity of the emergent properties to variations in key parameters. The model was developed using life history data of female southern elephant seals from Macquarie Island and follows individuals from birth to death. The information collected in the raw output are the same for the baseline model (stable, and with standard parameters), and the modified models to test for 1) low, and 2) high food availability, 3) low, and 4) high weaning thresholds (energetic level at which pups transition to juveniles), 5) low, and 6) high puberty thresholds (energetic level at which juveniles transition to physically mature adults). As well as recording the parameter values as set in the model, each .csv file records: 1) run number (usually 1-10) 2) step (time step, days) 3) min age at first breeding (years) 4) min age of adult 5) mean age of adult 6) mean age of juvenile 7) max age of individuals 8) max number of pups per female 9) fecundity 10) max size of individuals 11) mean size of adults 12) mean size of juveniles 13) total count of modelled population 14) total count of embryos 15) total count of pups 16) total count of yearlings 17) total count of juveniles (includes yearlings) 18) total count of adults 19) mean food availability of independent individuals (those not reliant on their mother) that are not fasting/moulting 20) carrying capacity (or expected equilibrium) 21) seed NB. NetLogo calls individuals within the model turtles - thus output will mention turtles. Stages are as follows 0 = foetus, 1 = pup, 2 = juvenile, 3 = adult. Status are as follows, 0 = dependent on mother, 1 = fasting, 2 = foraging.

The Petrel Sub-basin Marine Environmental Survey GA-0335, (SOL5463) was undertaken by the RV Solander during May 2012 as part of the Commonwealth Government's National Low Emission Coal Initiative (NLECI). The survey was undertaken as a collaboration between the Australian Institute of Marine Science (AIMS) and GA. The purpose was to acquire geophysical and biophysical data on shallow (less then 100m water depth) seabed environments within two targeted areas in the Petrel Sub-basin to support investigation for CO2 storage potential in these areas. This dataset comprises an interpreted geomorphic map. Interpreted local-scale geomorphic maps were produced for each survey area in the Petrel Sub-basin using multibeam bathymetry and backscatter grids at 2 m resolution and bathymetric derivatives (e.g. slope; 1-m contours). Five geomorphic units; bank, plain, ridge, terrace and valley, were identified and mapped using definitions suitable for interpretation at the local scale (nominally 1:10 000). Maps and polygons were manual digitised in ArcGIS using the spatial analyst and 3D analyst toolboxes.