IMAS Metadata Catalogue
Ecological Impacts of Climate Change
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This record contains the R code and bibliographic data used in the publication 'Reciprocal knowledge exchange between climate-driven species redistribution and invasion ecology' (doi:10.21425/F5FBG60804). The aim of this study was to examine the current degree of cross-fertilisation between range shift ecology and invasion ecology, as a first step in determining the level of need for increasing connection between the two fields. To that end, here we examine (1) the structure and degree of similarity of themes explored within range shift and invasion ecology publications, (2) the extent that range shift and invasion publications draw on a common pool of research, and (3) the extent that range shift and invasion publications directly cite publications from the other field of study. This dataset includes: 1) R code used in the litsearchr package to generate a semi-automated search string, 2) publication data used for bibliographic analysis, and 3) R code used with the bibliometrix package for keyword co-occurrence analysis.
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Coral community transect data collected concurrent with coral disease surveys in in the vicinity of Hoga Island in the Wakatobi Marine National Park, Sulawesi, Indonesia. Three replicate 20 m transects were collected by divers in each of reef flat, crest and slope habitats in 2005 (four sites, point intersect transect data), 2007, 2010 and 2011 (all six sites, line intersect transect data). For further detail see: Haapkylä, J., A. S. Seymour, J. Trebilco, and D. Smith. 2007. Coral disease prevalence and coral health in the Wakatobi Marine Park, south-east Sulawesi, Indonesia. Journal of the Marine Biological Association of the UK 87:403. Haapkylä, J., R. Unsworth, A. Seymour, J. Melbourne-Thomas, M. Flavell, B. Willis, and D. Smith. 2009. Spatio-temporal coral disease dynamics in the Wakatobi Marine National Park, South-East Sulawesi, Indonesia. Diseases of Aquatic Organisms 87:105–115. Haapkylä, J., J. Melbourne-Thomas, and M. Flavell. 2015. The association between coral communities and disease assemblages in the Wakatobi Marine National Park, south-eastern Sulawesi, Indonesia. Marine and Freshwater Research.
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The demersal fish assemblages on the Kerguelen Plateau has changed through time. This study aimed to detect, quantify, and map these changes. This study uses existing data collected from the Random Stratified Trawl Survey (RSTS) program administered through the Australian Antarctic Divisions (AAD). Raw RSTS data between 2000 and 2016 was extracted from the AAD database. The RSTS data contains information on the abundance (catch per unit effort, CPUE) on fish. RSTS data were paired with environmental data to be modelled. Hierarchical models of species communities (HMSC) were used to make inferences and predictions in the changes of demersal fish distribution. This record contains all the environmental data, R code, and outputs from this project. Raw RSTS data needs to be requested from the AAD under the authorization of AFMA.
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The spatial extent of C. rodgersii "barrens" was estimated by surveying rocky reef habitat with a towed underwater video system. Sampling took place at 13 regions along the east coast of Tasmania, each comprising 3 subsites, this dataset refers to the Eddystone Point region, and its 3 subsites: Georges Bay, Lighthouse Point and Purdon.
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The spatial extent of C. rodgersii "barrens" was estimated by surveying rocky reef habitat with a towed underwater video system. Sampling took place at 13 regions along the east coast of Tasmania, each comprising 3 subsites, this dataset refers to the South Bruny Island region, and its 3 subsites: Mangana Bluff, Bay of Islands and Cape Conella.
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In this dataset, we compared growth of Fraglariopsis cylindrus and Phyaeocystis antarctica collected from coastal and open ocean water at 3 °C, 5 °C and 7 °C, with and without additions of 5 nM dFe(II).
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The spatial extent of C. rodgersii "barrens" was estimated by surveying rocky reef habitat with a towed underwater video system. Sampling took place at 13 regions along the east coast of Tasmania, each comprising 3 subsites, this dataset refers to the Four-mile Creek region, and its 3 subsites: Falmouth, Ironhouse Point and Saltwater Inlet.
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The spatial extent of C. rodgersii "barrens" was estimated by surveying rocky reef habitat with a towed underwater video system. Sampling took place at 13 regions along the east coast of Tasmania, each comprising 3 subsites, this dataset refers to the Forestier Peninsula region, and its 3 subsites: Sisters, Visscher Island and High Yellow Bluff.
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The spatial extent of C. rodgersii "barrens" was estimated by surveying rocky reef habitat with a towed underwater video system. Sampling took place at 13 regions along the east coast of Tasmania, each comprising 3 subsites. Substrate and habitat type were recorded using video analysis, with 4 categories of urchin barren habitat recognised (see below for definitions).
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The spatial extent of C. rodgersii "barrens" was estimated by surveying rocky reef habitat with a towed underwater video system. Sampling took place at 13 regions along the east coast of Tasmania, each comprising 3 subsites, this dataset refers to the Recherche region, and its 3 subsites: Eliza Point, Fisher Point and Actaeons.