EARTH SCIENCE | BIOLOGICAL CLASSIFICATION | PROTISTS | PLANKTON | PHYTOPLANKTON
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This file contains data and associated R code for producing the figures, tables and analysis/models within the manuscript Ferderer et al., Carbonate chemistry fitness landscapes inform diatom resilience to future perturbations. Data was collected at IMAS by Aaron Ferderer.
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This repository contains data files (netCDF format) related to the model configuration developed and used by Joan Llort between 2011 and 2019. The model is a 1D configuration based on PISCES v1 and the specific routines and namelist are here: https://github.com/jllort/PISCESv1_1D The data in this repository is organised in two groups: - The first group contains the forcing files used to create and idealised representation of Southern Ocean water columns. Forcing files were automatically modified to force PISCES models with different mixed layer depth and iron environments. The files presented here are for a single water column but they can be modified using the python routines in the GitHub link above. - The second group contains the outputs for one of the experiments. We studied the impact of changes in ferricilne, winter mixed layer and summer mixed layer depths over Southern Ocean primary production.
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Data collected from Southern Ocean phytoplankton laboratory culture experiments to examine the effect of iron limitation on the Chlorophyll fluorescence (F) to chlorophyll (Chl) ratio. Irradiance levels at which cultures were grown are indicated by the photon flux density (PFD). Growth rates of Fe limited cultures (-Fe) relative to Fe replete cultures (+Fe) are referred to as μ / μmax (unitless).
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Here, we hypothesize that Fe uptake rates by sea-ice algae and under-ice phytoplankton are higher than the rates reported for open ocean phytoplankton in the SO. We performed 55Fe and carbon (14C) short-term uptake field measurements in, on and under Antarctic sea ice. We collected under ice seawater, melted snow and sea-ice cores. We then spiked them with 14C or 55Fe radiotracers to measure Fe and C uptake rates by sea-ice algae. Samples were then filtered, and residual radioactivity on the filters measured liquid scintillation counter (Packard).
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Ocean alkalinity enhancement (OAE) is an emerging carbon dioxide removal (CDR) strategy that leverages the natural processes of weathering and acid neutralisation to durably store atmospheric CO2 in seawater. OAE can be achieved with a variety of methods, all of which have different environmental implications. One widely considered method utilizes electrochemistry to remove strong acid from seawater, leaving sodium hydroxide (NaOH) behind. This study evaluates the impacts of OAE via NaOH (NaOH-OAE) on a coastal plankton bloom, with particular focus on how macronutrient regeneration in the aftermath of the bloom responds to the perturbation. To investigate this, we enclosed a natural coastal phytoplankton community, including coccolithophores, in nine microcosms. The microcosms were divided into three groups: control, unequilibrated (512.1 ± 2.5 µmol kg-1 alkalinity increase) and equilibrated (499.3 ±5.65 µmol kg-1 alkalinity increase). Light was provided for 11 days to stimulate a bloom (light phase) and lights were turned off thereafter to investigate alkalinity and nutrient changes for 21 days (dark phase). We found no detectable effect of equilibrated NaOH-OAE on phytoplankton community and bacteria abundances determined with flow cytometry but observed a small yet detectable restructuring of phytoplankton communities under unequilibrated conditions. NaOH-OAE had no significant effect on alkalinity, NOx- and phosphate regeneration, but increased silicate regeneration by 64% over 21 days under darkness in the unequilibrated treatments where seawater pH was highest (8.65 relative to 7.92 in the control). Additional dissolution experiments with two diatom species supported this outcome on silicate regeneration for one of the two species, thereby suggesting that the effect is species specific. Our results point towards the potential of NaOH-OAE to influence regeneration of silicate in the surface ocean and thus the growth of diatoms, at least under the very extreme NaOH-OAE conditions simulated here.
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This record presents data used in the paper 'Controls on polar Southern Ocean deep chlorophyll maxima: viewpoints from multiple observational platforms,' Philip W Boyd 𝘦𝘵. 𝘢𝘭., submitted to Global Biogeochemical Cycles, November 2023. All methods for the following datasets are detailed and cross-referenced in the paper. Data were collected from a range of methods, including: • vertical profiles (from 1 m resolved profiling using sensors on a CTD rosette: temperature, salinity, chlorophyll fluorescence, transmissivity - all calibrated) • vertical profiles (from discrete samples collected from CTD rosette or trace metal clean rosette, for nutrients, chlorophyll, POC, dissolved and particulate iron, active fluorescence, net primary productivity, biological iron uptake) • tow-body sections (undulating tow body (Triaxus) for temperature, salinity, chlorophyll fluorescence, transmissivity (and the ratio of chlorophyll fluorescence, transmissivity) • time-series observations from a robotic profiling float (BGC-ARGO) for temperature, salinity, chlorophyll fluorescence, and transmissivity).
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In this dataset, we compared growth of Fraglariopsis cylindrus and Phyaeocystis antarctica collected from coastal and open ocean water at 3 °C, 5 °C and 7 °C, with and without additions of 5 nM dFe(II).